YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56695683, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRTNQPERP KMKKFVAVLA ATTALATPAL AQEITEFRIG ILGGENAQDR LNSNECLREK  60
   61 AEDLLGVETK LFAPADYNGV IQGLLGGTID MAWLGASGYA KTYLSDPEAV EPILVKVNND 120
  121 GGYGYYSIGF ARKDSGITSL ADMKGKVFGF GDPNSTSGFL IPSIEIPQET GATMTSGDYF 180
  181 GEVKFTGGHE QTIVAVGNGE VDGGVTWADG LGAWEDGFNS GALRKAVDAG LVDMNDLVQI 240
  241 WQSKPIPEGP FVVRKALPAD VKVKMTGLLA SLKSMDEDCA YGVLQGDAKG FMPITHDAYE 300
  301 VIIEARKLKS N

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	311	0.99