YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56695663, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDICVMNAV KDRMLSRRDL FRTGAVVAAG AALGSVAAPP AMAAGIGEVR DMTHVYDADF  60
   61 PTYFGAPGIE AVQNFNFKEH GFNLFTLTLN EHTGTHVDAP LHFSADGQSV DEIPVGNLVC 120
  121 PLCVVHIHEK AAADADAQVT PDDLKAWISA HGPIPDGACV AMHSGWAGKT GGAGYRNADS 180
  181 EGKMHFPGFH VEAAQMLIEE TGAVAMAVDT LSLDHGPSAD FATHYAWLPT NRYGIENLAN 240
  241 LDKVPASGAT LIVGAPNHRG GSGGPARIFA MV

Type	Start	End	Confidence
Signal Peptide	1	43	0.75
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	272	0.99