YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677376, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLIRLARH ASFAPVLVAC LALFILMVMT FCDVILRSVL NAPIEAATEL TRILMAVLVF  60
   61 SVLPIISVNN GQIAVDLTDG LFHRLRLDRI RDGLIHLVSG IMLYWPMSRV WILAERSRDY 120
  121 GDVTEYLAIP TYIVGWFIAI SVGISAVALV ITGLLHLFAP RLLSEALK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.85
Transmembrane Helix	12	32	0.90
Non-Cytoplasmic	33	52	0.75
Transmembrane Helix	53	73	0.90
Cytoplasmic	74	92	0.87
Transmembrane Helix	93	113	0.90
Non-Cytoplasmic	114	132	0.91
Transmembrane Helix	133	158	0.89
Cytoplasmic	159	168	0.91