YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677244, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSGYLFSV RGRVACVTGA SSGLGRRAAT VLAQAGAQVV GVARRADALA EWQAEAGGET  60
   61 HAIPYDLSDR DGLEGLARQV VDPFGAPDIL VHAAGINTRQ PADEVTPEGW DITLTLNLSV 120
  121 PFFLSQYLVP GMKARGWGRI VNFASLQTTR AFPGGIAYGA SKGGVAQMTR AMAEAWSPHG 180
  181 ITANALGPGF FRTELTAPVF ADPERAARNA AQTCIGRNGE PEDLDGPLLF LCSQASAYVT 240
  241 GQVLMVDGGY TAK

Type	Start	End	Confidence
Signal Peptide	1	33	0.55
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	253	0.98