YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677241, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLARREGHV TPILNALNRN AERWALLVFY VMLVVTMAVE VLRREIFAYS SIWGEEIVRY  60
   61 SFIYLAWIGA ASAVKERGHI RIDVLMHYLG RRAKALLYIF GDLVMFVVAV IALYWSFETV 120
  121 LVSAKFGSVS HGLRISMVWF LMAVPVGFSL MVLRLVQSFL RDLRSLRDGT PVYEGDKLFD 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	20	0.96
Transmembrane Helix	21	42	0.88
Non-Cytoplasmic	43	56	0.86
Transmembrane Helix	57	74	0.91
Cytoplasmic	75	94	0.91
Transmembrane Helix	95	117	0.93
Non-Cytoplasmic	118	134	0.94
Transmembrane Helix	135	156	0.93
Cytoplasmic	157	180	0.97