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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695484, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.64
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPLRLKFF VFAVLLAMGP LALVGQNLTQ LTRDELKSAA NEDLTTVAAE LRATFDNTFQ  60
   61 GRWLTPLTVI RNGVDSADLG VPQKISLLTL GLQELSQVVA LQLSIEGSDL PIIVTNEGFA 120
  121 TRLSEAGLNP VEALATSSEL IKAIAGTGQY GRPVITRLEE TGDWLATLAL PLETRIAGRQ 180
  181 VTMAARIDLG LLGETVRRHP FAQRGEITVV DQAGRRVLTG TPELLDKRRI VASTLPLIVA 240
  241 GARADALEPY VRPDGTAMLG AYAFPDWFPW AVITELSEDN AYAVVNAITR QILTVGLVGF 300
  301 AVAAAAALLF ARQLTRPILM IGQVAQRVGE GDFSARVEDV RARDEIGDLA ARFNRMIAHL 360
  361 GERVELMKFV SHSTMSAIQS AERTGMARGG QRRRVSVIFT DIRGYTEFSE RVPPETVIEV 420
  421 LNSYFDAQTD IVEHYKGDVD KFVGDALVAV FEGDGMEARA VACAVGITEA MARLLEENPE 480
  481 HGLHVGIGVA SGEVVMGAMG ARDRMDFTVL GSTVNLSARL CSKAAADQVL IDRETRDAAV 540
  541 LEDIVYEPLE PIALKGYAAP VPAFAALRKA G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle