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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695476, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSHYRVVVI GGGVVGASVL YHLAKFGWTD VVMLERRRLA SGSSWHAAGG IHALNADPNM  60
   61 AALQAYTIDL LSEIEKESGQ NIGLHMTGGL TLAGTPERWE WLQANYRIFQ SIGIDDCELL 120
  121 TPQEAQRRCP IMSTDGVLGA MWADREGYID TTGTVQAYAT AARKRGAEYY EDTKVEQLIQ 180
  181 TADGWQVVTD KGTITCEHVV NAAGLWAKQV GRMAGVELPV SPLKHHYLIT DTVPEVAAAE 240
  241 FEMPMTVDLE GFTYMRQDQK GILVGIYEIN HEHWAMDGAP WNYGEELFQE QLDRIENELM 300
  301 LGFARYPSIQ DVGIKTWVNG AFTFSPDGNP LVGPVPGKRG YWSACAVMAG FLQGGGVGKT 360
  361 LAEWMIHGEP EADAWSMDVA RYGDYAQNKR YIRETTGQFY SRRFVMSYPN EQLPAGRPLK 420
  421 MAPAHDAMTA AGCRWGVSWD LEVPLYFAPS EDFVENLTLK RSNAHPIVAE ECRVIREGVG 480
  481 LLDITGFSRF EVSGPNAEAW LDKLFATKLP APGRARLAVM LSETGRLKGD LTLLNWGDGT 540
  541 WWIMGSYYLR AWHMRWFNDH LDDGVSVRDL GEEICGFGLV GPKSRTVIEK LAEQDISELK 600
  601 FMGCGSFDIG LVRARVARMS VTGEMGYEIN CRYGDHIALR RMLLEAGAGE DICEVGFNAL 660
  661 LSTRIEKSFG IWSAEFTQDR TPGMTAMDRW IAWDKGDFIG RDAAIAERDG NGPARVQVTL 720
  721 EVDAADADAS GYEPVWADGV QIGFVTSGAY GHYTGKSLAM ALVDRDRAHP GTSVSVHVVG 780
  781 VERPATIIAP SPYDPDGKAM RG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle