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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695332, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSARDMDK VQRVLTRRTL LLGGIQAAFI GGLAMRMRYM QVDQADQFRL LAEENRINIR  60
   61 LIPPSRGELF DRNGAIIAQN TPSYRIVMVR EDAGDVDAVV ANLQRLIPLD PEELDRALAE 120
  121 MRRSPPFLPV TLADQISWEH ISKVAVNAPA LPGITPEVGL TRVYPQASDF AHVVGYVGPV 180
  181 SDYDLSQIQD PEPVLRIPRF QIGKVGLEAK QEDLLRGKAG AKRVEVNANG RVMRELDRRE 240
  241 GKPGADLQLT VDSALQSYVQ ARLGQESAAA VVIDCETGDL RAIASAPSFD PNLFVRGISV 300
  301 ADYRGLTEDP YRPLANKSVQ GAYPPGSTFK MITAMAALEA GITNPEETVY CPGFLEVSNR 360
  361 RFHCWKRGGH GHMNLEESLE QSCDVYYYDV ALKVGIDRIS AMAEEFGLGV RHDIPMSAVA 420
  421 RGLAPNRDWK ARVHGQDWLV GDTANASIGQ GFMLASPLQL AVMTARIATG RKVAPRLVKS 480
  481 IDGVEQPSGA GEPLAVNQAN LRRLRKGMYA VSNNRRGTAY RSRILADDNR MAGKTGTSQV 540
  541 RNITAAERAA GVIRNEDLPW ERRDHALFVC FAPFDNPRFA VSVVVEHGGG GSTAAAPIAR 600
  601 DILLQALYDG FPPLESYPAK DRSRIEAQQE RLRRELRPVT RPEDKDRA

YRC Informatics Platform - Version 3.0
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