YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56695274, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYLTDRKRA VGMGSAKTGT AHFWAMKVSS VALLILIPLF VFTFGPMLGE PHQAVLDYFS  60
   61 RPFPAIVAAL TLVVGFKHFA DGAQVLIEDY VHGLMQKILI ILVICLSYAA AATGLFAIAR 120
  121 IAL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.91
Transmembrane Helix	21	42	0.93
Non-Cytoplasmic	43	60	0.79
Transmembrane Helix	61	80	0.85
Cytoplasmic	81	97	0.79
Transmembrane Helix	98	119	0.94
Non-Cytoplasmic	120	123	0.65