YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677010, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVNRGNRP LSPHLSIYRP QLTSITSILT RITGNALLFA ALLIVWWFLA AATSPEYFAV  60
   61 ADGVITSLIG DLVMALSLWG LWYHTLAGIR HLIWDNALGL DLPTAEKLGW AVVIGSVLLT 120
  121 ILTLVVIA

Type	Start	End	Confidence
Cytoplasmic	1	27	0.89
Transmembrane Helix	28	50	0.88
Non-Cytoplasmic	51	63	0.70
Transmembrane Helix	64	86	0.85
Cytoplasmic	87	107	0.80
Transmembrane Helix	108	127	0.94
Non-Cytoplasmic	128	128	0.88