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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56676987, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRNRPPNLP LPRFALGLTH AGLWAERLWR GFWPFLSVLM LALAPILLGL HELVPVEWVW  60
   61 AFAAGFALVL VVTLVLGLRR FRRPVRAEAL ARLDAALPGR PIQTLMDEQA IGAQDPASAA 120
  121 LWRAHQARMA ARVANAEPVA PDLVLTRRDP YGLRFMAALC FVAALLFGSV WRVGSVVDLA 180
  181 PGAAQAATGP SWEGWIEPPR YTGLPTLYLN DQTGEVLQLP QGSRITLRLY GEVGQLRLTE 240
  241 EVSGKPLERP DHPEQTVEVT RSGPFEIEGR GGRGWQVVML SDTAPQVEIA GAAETRAGGQ 300
  301 MVLPFAAMDD YGITGGRAVI ALDLEAVDRR YGLRTDPDPR DPVVADLPLP ITGDRREFTE 360
  361 NLIEDFSQHP WAHLPVTITL IAQDAAGQEA ETLPFGTALP ARRFFDPLAA AVIEQRRDLL 420
  421 WSRDNATRVA QILRAVSHRP DDVFRSQTAY LRLRVILRRM EALQRFGLKP AQQEEIAQAL 480
  481 WDLAIMLEDG TLSDALERMR RAQERLSEAM KNGASDQEIA ELMQELREAT QDYLRQLAQN 540
  541 QQNEQDGERQ AQEGESLQMT QDDLQKMMDR IQELMEQGRM AEAQQALEEF QQMMENMRVT 600
  601 QGQGDNGQSE GQRAMEGLAE TLRNQQGLSD QAFRDLQEQF NPGAQAGESQ QNEGRNGGEG 660
  661 RGQSHEGQGQ GSRQSGTGQD GAQQGEPGET GEGSLAERQQ ALRNELGRQE QNLPGQGTPE 720
  721 GDAAREALDR AGRAMEGAEE ALRENDLAEA IDRQAEAMEA MREGMRSLGE ALAQQSQPGQ 780
  781 GSQEGDQRAR NQDPLGRTPG SQGGVDTDES LVPGDDVYRR ARDLLDEIRR RSGESDRPKV 840
  841 ERDYLKRLLD RF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle