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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695131, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEGFRRAGL KNTGLPPCPS LARLRVRGAQ EMAGNLYFLI GGIGMFLLGM ELMTAALRDT  60
   61 AGSRLRGVLT RFTTTPLRGV MTGAAATAVV QSSSATTVMT VGFVGAGLMT MPQALGILYG 120
  121 ANIGTTATGW LVSLLGFKLK LGNLALLLLF PAALADLLAR GPLARAGRTV AGLCLLLIGL 180
  181 DLMQSGASDL TAYLTPESLP GSGMGGLLLL VGLGATVTIV MQSSSAAMAL ALVMLSGGAI 240
  241 TLLQAAAIVI GMNIGTTFTA VLASTGGSVP MRQTALANLI FNIVTSVLAF PLLLLLRPVF 300
  301 ESAAGLGDDL SVLLLFHTGF NLVGTALFLP LTGCFAGLVA RLLPERESDQ LFVPDRSLLK 360
  361 DANAALLAAQ SGTRTVAERM FSALGAGLAP APDYRPIAAL TPCVRALEDL RAFLSEIRLP 420
  421 PDRAQDIETF SDILHQIDHL TRLLDRARQT GNIDTLLHDR LLRRSALGAG AALRRSGAAL 480
  481 GALPEGMRLE RLRHLIGARR KRHRRAMMLG EHVGLFSLDQ VFAHTDAMRW LDRVLHHAER 540
  541 VAHYHRAAAA RLPAADAPPR AETG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle