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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695122, gi|...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQIRSVWAS LDKKKQFIVI GAALVVFLGV LGLTRMAGSP NMQLLYAGLE SGSAGEVVRS  60
   61 LEQQGVPYEV RGGSIYVPAA RRDELRLTLA SEGLPANGGR GYELLDSLSG FGTTSQMFDA 120
  121 AYWRAKEGEL ARTIVASPHV AQARVHIANS SSNPFQRSIE PTASVSVVPS GSEVTPAQAN 180
  181 AIRYLVASAV SGMVAEGVTV VDSNGNVIGT PETPTSSTSE DRAQQMRERV LRLVEARVGR 240
  241 GNAIVEVSLD TVTETESIRE RRFDPNGRVA ISTDVEERSD ASKNQTTDVT VASNLPDGDG 300
  301 AVGDESNSST SATRERVNYE VSETETEILR TPGAIKRLSV AVLVNGLPGA AQDGSSQFTP 360
  361 RPEEELAALR ELVESAVGFN QDRGDVITLK SMELPNLEPQ GTLASSSMLQ GLTFDLMSLI 420
  421 QMATLALVTL VLGLFVVRPI LTKPAVSAPL LAVAPPPNQS GAQSAGPALT GEIDDGSPRQ 480
  481 NQLPGAATQQ RGTVPALVGS SGTPVDRLRA MIGDKQEETV EILRSWLEEN EEKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle