YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARGJ_RUEPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKITKVSPL APAAFPTLPV IDGVRLASIA AGVRYQGRTD VMLAVLDPGT SVAGVFTRSA  60
   61 TRSAPVLDCQ AKIGGASDGP AAILVNSGNS NAFTGHYGQT SVAEVTQAVA DVTGVPVGRV 120
  121 FTSSTGVIGE PMKHERIVAK LGDLNAALSP DALEDAARAI MTTDTFAKGA SRTVGIDGKM 180
  181 VKIAGIAKGS GMIAPDMATM LVYIFTDARV EQGALQAMLS AMTDKTFNCI TVDSDTSTSD 240
  241 TLLLCATGAS GVDAEGNAEF AAALEAVMLD LAQQVVRDGE GATKFVEIRV TGAANDVDAK 300
  301 VHGLAIANSP LVKTAIAGED PNWGRVVMAI GKSGAAADRD LLSISFGDIL VAEKGWVSPN 360
  361 YREEDAAAYM KGQDLVIGVD LGLGAGKSTV WTCDLTHGYI EINADYRS

Type	Start	End	Confidence
Signal Peptide	1	23	0.70
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	408	0.99