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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56421941, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPIPGSRFR GTWKYVRAAV FIGFFLVIFA FAALGSFVLF AKIEGAPPVA VPQTTIFYAA  60
   61 DGSKIGESDH GQKRYWVRLK DMSPHIIEAT IAVEDRKFYE HHGFDLKRIA AAIIANVEAM 120
  121 AKVEGASTIT QQYARNLFLT HEKTWSRKIQ EALYTIRLEA NYSKDQILEG YLNTIYYGHG 180
  181 AYGIEAAARY YFGKHASELT LSEAAMLAGI PKGPYYYSPF VNEQRAKARQ KIVLTSMVEA 240
  241 GYISRQEAEQ AYRDKLVYAR HHKQEQPIAP YFQDVVKQQL RTKLGLDERT IELGGLRVYT 300
  301 TLDPRLQRIA EEQIRRIIDP HSAIQAALVA MDPHTGEVKA LVGGRNYEES PFNRAVQAER 360
  361 QPGSTFKPFL YYAAIEQGFT PSTQLRSELT TFTFNGGRSS YTPHNYNDYY ANGPITLAEA 420
  421 LAVSDNVFAV KTLQFIGADK LVDTAKALGI TSRLKAVPSL ALGTSPVKVI DMVAAYSTLA 480
  481 NYGKQTEPVF IQKVVDANGN VLYEHKPESR QVLDRDAAFV TTHLMTGMFD PKLNGYTTVT 540
  541 GQSIIDDITR PYAGKSGTTK TDSWMIGFAP QLVAGVWTGY DRGETMDRPA ERQYAKQIWV 600
  601 HFMEQSLAGE PKKSFKPTKG VIGVYIDPQN GKLATDSCPV KRKTYYIAGT EPVDYCTDHV 660
  661 KEEKKKKEDG KSWFEKWFPW F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle