YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56381646, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVRKAIIP AAGLGTRFLP ATKAMPKEML PIVDKPTIQY IVEEAIASGI EDIIIVTGKG  60
   61 KRAIEDHFDY AFELEQMLKQ KGKLDLLEKV KEPSKVDIHY IRQKEPKGLG HAVWCARNFI 120
  121 GDEPFAVLLG DDIVQAEKPC LKQLIEQYEQ TFSSVIGVKR VPEEETHRYG IIDPLEQQGR 180
  181 RYQVRRFVEK PAPGTAPSNL AIVGRYVLTP EIFLFLEKQE AGAGGEIQLT DAIGRLNEIQ 240
  241 RVFAYEFEGK RYDVGEKLGF IETTIEFALQ NEELRDDLLS FLERVVAEAK GSKNN

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	295	0.99