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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56381385, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRIRRAAV LGSGVMGSGI AAHLANVGIP TLLLDIVPRE LTKEEEAKGW TLEHKQVRNR  60
   61 LANQALERLL KQKPAPLMSK DNIALIETGN FEDDFHRLAE VDWIIEAVVE KLEVKKEVFA 120
  121 RVDEVRTPGT IVSSNTSGIS IAAMAEGRSD DFKKHFLGTH FFNPPRYLKL LEIIPTEHTD 180
  181 PDVVAYMKSF GEDVLGKGVV MAKDTPNFIA NRIGTYGLLV TVREMMQGGY SVGEVDSVTG 240
  241 PLIGRPKSAT FRTLDVVGLD TFVHVANNVY ENVEGEEKEA FRVPEFMKTM LENGWLGSKS 300
  301 GQGFFVKQGK DILELNYVTM QYEPRKKLVT PAVEMAKQAK GAAAKLQTLV YADGDRAGTL 360
  361 LWNIIAPTLL YTARLVGEIA DDIAAIDQAM KWGFGWEQGP FELWDAIGLE KSVRKMQSEG 420
  421 RDIPSWITDM LADGATSFYK TENGRLFYYA PGGYKTVEEN EKVIHIRRLK EARGVIKKNA 480
  481 GASLIDLGDD VALLEFHSPN NAIGADIVQM INEALEEVNR NYKGLVIGNQ GKNFCVGANL 540
  541 AMMLMEAQDE NFFELELAVR QFQQALLKMK YNPKPVVVAP FAMTLGGGAE VSLAASRIQA 600
  601 AAETYIGLVE VGVGLIPGGG GNKELYIKRL NSLPRGVDVD YVKIAASVFE TIAMAKVSTS 660
  661 AAEARELGFL NHRDGITMNG DHLLYEAKQA VLSMYEEGYR PPVRKKVPVA GESGYAAMLL 720
  721 GAQSMFHSGY ISEHDLKIAK KLAYVLAGGK VPYGTEVDEQ YLLDLEREAF LSLIGEPKTQ 780
  781 ARMQHMLVKG KPLRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle