YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56381330, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPNVVILG AGYGGLMTTV RLQKLIGVNE ANITLVNKHD YHYETTWLHE ASAGTLHHDR  60
   61 VRYPISDVID RNKVKFIQDT VTKIIPNEKK VLLENGELTY DYLVIALGFE SETFGIKGLK 120
  121 EYAFSIANVD AARQIREHIE YQFATYNAEE EKKEERLTIV VGGAGFTGIE FLGELANRMP 180
  181 ELCREYDIDP HKVRIICVEA APTALPGFDP ELVEYAVSQL ERKGVEFRIG TAIKECTPDG 240
  241 IIVAKGDDVE EIKAGTVIWA AGVRGSRVIE ESGFEAARAR IKVDPYLRVP GHEDIFVVGD 300
  301 CSLVIDEETN RPYPPTAQIA MQEGQLCAKN LAVLIRGQGE LEPFKPDIKG TVCSLGHDDA 360
  361 IGVVFGKKLW GAKASFMKKV IDNRALYLIG GSSLVMKKGK FKFF

Type	Start	End	Confidence
Signal Peptide	1	22	0.49
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	404	0.99