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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56380658, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHVKCECGH VNPHGTAFCE SCGKPLADLG EKLILDMRYE GSARRSQTYK KTMIDQIWAF  60
   61 FSSVKVGVAL IVITLIASAI GTIFPQQMYI PPNVDPAEYY KQQYGWAGKL YYELGFNNLY 120
  121 GSWWYILLIA LIGVSLVICS LDRVVPLYRA LKRQGVKRHP RFLERQRLFG VSHVSDLDKT 180
  181 MAVLKERLAA RRYHVREEDG HLLAEKGRFS RWGPYVNHIG LIIFLIGAML RSVPGMYIDR 240
  241 VMWIPEGETK EIPGTNGRYF LKSEKFIFET YEKGKGNEVF NAAIDRVGNG MIAKNYQTNV 300
  301 VLYKRVGPVI PGAKPKLEKV KEYPIRVNEP LEFDHYALYQ VDFRLNEPKA MSFQLADKQS 360
  361 GETFGTVTVD LYDPKESYNL GHGYRVELLS YFPDFEFDED GNPSTKSRVP NNPAFVFKMY 420
  421 APDRPKGEVS FVAIQQTIEP FGNNKYKMAF AGLQTRNVSG LTVRRDFTLW ILGVGGAIFM 480
  481 IGLIQGMYWN HRRIWVQRVN GELWIAAHTN KNWFGLKNEL RRLLDGTGVM MPADQLENDK 540
  541 KAGQGGQVHG HGTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle