YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56380608, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKWVLFIA LAVWTCIYPS GHAFAFSPQV IQRGAVGDDV IELQARLQYL GFYNGKIDGV  60
   61 FGWRTYWALR NFQYEYGLPV DGLAGSETKR KLVNASKYYE QFVKEQIRQG NDFTHYGGIP 120
  121 LSQQVKKRGG GSSRAAKTTA SNVPKGFSQN DIRLMANAVY GEARGEPYIG QVAVAAVILN 180
  181 RLEHPSFPDT VAGVIFQPGA FTAVADGQIW LTPNETAKKA VLDAINGWDP TGGAIYYFNP 240
  241 ATATSAWIWS RPQIKRIGNH IFCK

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	264	0.99