YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229499644, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKAWKWWI AVALTALLSA VALTGCSTTD KGEGGTSSET AKATNTLEKI KQRGKLIVGV  60
   61 KYDLNLFGLK NPETGKVEGF DIDIAKGLAK KILGDENKIE LKEVTSKTRI PMLNNGEIDA 120
  121 IIATMTITEE RKKEVDFSDV YFMAGQSLLV KKDSPINSVK DLKKGMTVLT AKGSTSAENI 180
  181 RKVAPQVNVL EFENYAEAFT ALKAGQGDAL TTDNALLWGM AKQDPNYRVL DETFTEEPYG 240
  241 IAVRKGDKEL LQVINEYLKE IKENGEYDKI YEKWIGKKPQ Q

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	281	0.99