YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56380348, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGCIAMGLL FLTACSSGTT QGGNTDKTES KGIQPRVIKA GIGLNEDHPQ GQGLLKFKEI  60
   61 VEQKSGGKLK VQTYFSATLG DDLKMTEALQ GGTQEITIPS TSPLVGMIKE FGIFDFPFLF 120
  121 NTPEEADAIL DGPIGKKLLE KLPEHGLIGL GYWENGFRHV TNSKHAIKTA DDFKGLKLRT 180
  181 MQNEVHIDAF KALGANPTPM PFSEVFTALE SNTIDGQENP LATIKSNKFY EVQKYLSLTK 240
  241 HVYTPFVFLV SKKFWDQLSP EEQKILQEAA IEAGKYQRQL SREEDQKALE ELKKTGININ 300
  301 EVSDQEREKM AEIIKPVVEK YAKEFGEDLV NELYSELDKV RQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	342	0.99