YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56380060, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKGKAAIV TGGASGIGRA TAIRFAEEGA KVAVSDINEE GGEETVRLIR EKGGEAIFVQ  60
   61 TDVADSKQVS RLVQTAVDAF GGLHILFNNA GIGHSEVRST DLSEEEWDRV INVNLKGVFL 120
  121 GIKYAVPVMK QCGGGAIVNT SSLLGIKGKK YESAYNASKA GVILLTKNAA LEYGKFNIRV 180
  181 NAIAPGVIDT NIITPWKQDE RKWPIISKAN ALGRIGTPEE VANAVLFLAS DEASFITGAT 240
  241 LSVDGGGLTF

Type	Start	End	Confidence
Signal Peptide	1	22	0.91
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	250	0.99