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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56379491, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSYVTVRK RLTIVFLIGI LIFAIIDLRL GYVQFWLGDL LAERAKGLWG RNIPFEPKRG  60
   61 EILDRNGVPL ATNMSAPTVY VIPRQVKNPA EAAKKLAGVL GGSIESIYKQ ITQKTSIVRL 120
  121 KEGRKISDEK AANVRSLDLD GVYIAEDTKR YYPFGSYLSH VLGFTGIDNQ GLTGLELYYD 180
  181 KELRGERGSV QFYSDAKGRR MPDIADDYTP PTDGLNLVLT IDSRIQTIIE RELDIAEAKY 240
  241 NPDGIIAIAM DPNTGEILAM ASRPTFNPAD YRSVPPEIYN RNLPIWSTYE PGSTFKIITL 300
  301 AAALEEHKVN LLKDHFFDPG YAKVAGATLR CWKKGGHGDQ TFLEVVQNSC NPGFVELGER 360
  361 LGKETLFRYI KQFGFGEKTG IDLQGEGTGI LFDLKRVGPV ELATTAFGQG VSVTPIQQVA 420
  421 AVSAAINGGI LYTPYIAKQW VDPETGEIVR RNTPKAKRRV ISEETSKQVR YALESVVAQG 480
  481 TGKKAYVEGY RVGGKTGTAQ KAQGGRYLQN NHIVSFIGFA PADDPKLVVY VAVDNPKGTV 540
  541 QFGGTVAAPI VGKIMEDSLR TLGVKPRKDQ LEKERDWNEP KVIEVPNLIG MTKNDLQEQL 600
  601 FDLKLDVSGE GDVVVEQSPK PGAKVKEGST VRIYLAKREA VEER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle