YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56419562, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIGFIGLG VMGKSMARHL LKAGYPLLAY TRTKEKAEDL LQEGAVWKET VADLAREADV  60
   61 VMTMVGDPRD VEQVYFGEGG ILENARPGTY VIDMTTSTPT LAQSIYEAAK QKGIHALDAP 120
  121 VSGGDIGARE GTLTIMVGGD EDVFLACKPI LERLGTNIVR QGGAGAGQHT KMCNQIAIAT 180
  181 NMIGVCEAMA YAKRAGLDPF KVLESIAKGA AGSWSLSNLA PRMLSGDFAP GFYVKHFIKD 240
  241 MKIALEEAER MNLPLPGLAL AKQLYEELAQ AGEENSGTQA LYKRYVKA

Type	Start	End	Confidence
Signal Peptide	1	17	0.57
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	288	0.99