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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56419437, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQKHVTLR VTGMTCAACA NRIEKVLNKM DGVEANVNLA MEKATIKYDP SKQNIADIEM  60
   61 KIENLGYGVA TEKVTLDIEG MTCAACATRI EKGLNRMEGV TSAAVNLATN SAVVEYKEGV 120
  121 TSVEDILEKI KKLGYRGQIR NEEQDHAGRK EERLKQKQRQ LAISIILSLP LLYTMLAHMP 180
  181 FDIGLPMPHW LMNPWFQLLL ATPVQFYIGG PFYVGAYRAL RNKSANMDVL VALGTSAAYF 240
  241 YSLYEAWRTL GNPDYMPRLY FETSAVLITL VLVGKYFEAL AKGRTTEAIS KLVSLQAKEA 300
  301 TVIRNGEEMK VPLEEVVIGD TILVKPGEKI PVDGTVISGA SSVDESMITG ESIPVDKKEG 360
  361 DYVIGATMNT NGVLTIRAEK VGKDTALANI IKIVEEAQGS KAPIQRMADT ISGIFVPIVV 420
  421 GIAVVSFLIW YFFVAPGDLA KALEVAIAVL VIACPCALGL ATPTSIMVGT GKGAEQGILF 480
  481 KGGEYLEGTH KINAVLLDKT GTVTKGKPEV TDVLAFREDM LDYAVSAESA SEHPLAHAIV 540
  541 EYGKKQAISM KPLEHFSAIT GHGIEAVIDG KSILIGTRKL MKERSVAISV HEDKMVELEK 600
  601 QGKTVMLVAI DGQLAGIIAV ADTVKESSKE AIQTLKQMGI DVYMATGDNQ RTAEAIANEV 660
  661 GIEHVYAEVL PENKANIVEE LQKQGKRVAM VGDGINDAPA LAKADIGMAI GTGADVAIET 720
  721 ADVTLVGGDL RHIPKAIELS RQTMKNIRQN LFWALFYNTI GIPVAAFGLL EPWIAGAAMA 780
  781 FSSVSVVANA LRLKRVKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle