YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56418683, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYALNGRTL KKALIIICSA FFTAVVLYAY EMNRPVFSLP SGPKAVYKVD NARNEVALTF  60
   61 DISWGDENAD KILDVLKQHG IQNATFFLSA SWAERHPAVV KRIKEEGHEI GSMGYNFVNY 120
  121 TELENAKIRQ DLIMAKKVFD MLGIKQVELL RPPGGNFNKN VLKVAQSLGY TVVHWSIDSK 180
  181 DWLNPGTDQI VENVTRDLEP GDIVLLHASD SAKQTAKALP KIIASMKENG YKNVNLSELL 240
  241 ANGEAESRGI E

Type	Start	End	Confidence
Cytoplasmic	1	12	0.53
Transmembrane Helix	13	30	0.62
Non-Cytoplasmic	31	251	0.98