YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78355154, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNMKKWLF AALTVAVLVV SACAKAPYTG RNQFIMMDSQ QEMALGASEA QKVIKSEQID  60
   61 TTSDYARAVT RVGRRIAAVA GHPEYKWEFH TVKKDVPNAF CLPGGKIFVY TGLFEAAKDD 120
  121 AQLAAVIGHE VGHAIARHGA ERYSTQVVAQ LGQLGTAIAV GSQTSPEVAQ AAVAAYGIGV 180
  181 GVGILLPYSR THEYEADRIG LILMAKAGYN PEAALTFWQN MAAKGGKKPP EFLSTHPADE 240
  241 NRIKAIRQLL PEAKGYYRPA SS

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	262	0.93