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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77461013, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTRSPRTP KKPASRGLRP WLGWALKLSL VGLVVLAGFA VYLDAVVQEK FSGKRWTIPA  60
   61 KVYARPLELF VGQKLSKDDF LTELDALGYR REAVSNGPGA AAVNGNTVDL NTRGFQFYEG 120
  121 LEKPQPVRVR FSGDYVAELS ATNGSKLSVV RLEPLMIGGI YPKNLEDRIL IKLDQVPPYL 180
  181 LETLVAVEDR DFYSHWGVSP KSIARAVWVN TSGGKMTQGG STLTQQLVKN FYLTNERSLT 240
  241 RKLTEAMMAM LLELHYDKKE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF AQPLSELKLH 300
  301 QVALLVGMVK GPSYYNPRRN PERALERRNL VLDVLEQQGV ASAEQVAAAK KMPLGVTTRG 360
  361 KLADSSFPGF IDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKAEASV NDTFKRLSGR 420
  421 KGSDDVEAAM VVTNPETGEV QAMIGSRQAS FAGFNRALDA VRPIGSLIKP AVYLTALEKP 480
  481 SQYTLTSWLS DEPLSIKGAD GQVWKPQNYD RRSHGTVFLY QGLAHSYNLS TSRLGLAVGV 540
  541 PNVLKTLGRL GVTREFPAFP SMLLGAGGMT PIEVATMYQT LANGGFNTPM RGIRSVLTAD 600
  601 GEPLKRYPFQ IEQRFDPASI YLIQNAMQRV MREGTGSSVY NVLPRTLTLA GKTGTSNDSR 660
  661 DSWFAGFSQD LLAVVWLGRD DNGKTPFTGA TGALQVWTSF MRKADPLPLD MPQPDNVVQA 720
  721 WVDSRTGQGS DANCPGAVQM PYIRGSEPPP GASCAGESPA SGESVMDWVK GWMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle