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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77382829, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.13
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGHRNVVGC WRWFITRKRI RSDSVMNSLR SVSISRRLWL ILIVAVVMLL TLGVLMLKQI  60
   61 HDDLYHAKAQ KTQHVVQTAS GLLTYYQGLE AAGTLTRDVA QKQALTAIRG LRYDQNDYFW 120
  121 INDLTPVMVM HPTNPKLEGQ NLSAIRDPDG FAVFNEMVAI AKAKGAGMVD YRWPKPGASE 180
  181 PVAKTSYVKL FEPWGWVIGS GVYVDDVQAE FQGQVIKASV VGLVIAVIMA LLVILIARSI 240
  241 VRPLQETVNA MANIASGESD LTRSLDTHGQ DEVTQLAHHF NAFTAKLRRV IGDLQVSASA 300
  301 LGQSSSELGN DAAQAQQRSQ QQSQQMELVA TAVNEVTYGV QDVAKNAEHA ASEMRDAEAQ 360
  361 AQQGQINIDG SLQQIDKLSG TIDQAVEVIR TLATESTQIG SVLEVIRSIA EQTNLLALNA 420
  421 AIEAARAGEQ GRGFAVVADE VRLLAQRTQK STAEIQTMIE SLQNHSEAAV KVIGDSSKAS 480
  481 QLTIEQAGLA SASLNAIGQA LRNLNGLNAS IASATLQQAH VVEDINQNVT QAAGLSHSTA 540
  541 LAAEQSSVAS VKLGQLSEQL NGLLRQFRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle