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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77380997, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPDM  60
   61 ADATYIEPIK WQTVAKIIEK ERPDAVLPTM GGQTALNCAL DLEREGVLEK FGVEMIGANA 120
  121 DTIDKAEDRS RFDKAMKAIG LECPRSGIAH SMEEANAVLE RLGFPCIIRP SFTMGGTGGG 180
  181 IAYNREEFEE ICARGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRNASLA VLREIGVETG GSNVQFGICP DTGRMVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELQNDIT GGRTPASFEP SIDYVVTKLP 360
  361 RFAFEKFANA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVCGLD EKVDLSNPES 420
  421 MSVLKRELTV PGAERIWYVA DAFRAGMTVE EIFGMNMIDP WFLVQIEDLV KDEEKVKTLG 480
  481 LSAIDRDLMY KLKRKGFSDQ RLAKLLGVTE KNLRTHRHKL EVFPVYKRVD TCAAEFATDT 540
  541 AYLYSTYEEE CEAAPSGRDK IIILGGGPNR IGQGIEFDYC CVHAALALRD DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLEICR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQM VERLNLRQPP NATVRSEDEA VRAAAKIGYP LVVRPSYVLG 720
  721 GRAMEIVYKE EELKRYLRDA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGK DVVIGAIMQH 780
  781 IEQAGVHSGD SACSLPPYSL PARIQDEMRE QVKKMALELG VVGLMNVQLA LQGEDIYVIE 840
  841 VNPRASRTVP FVSKCIGISL AMVAARVMAG KTLKEIGFTK EIIPNFYSVK EAVFPFAKFP 900
  901 GVDPILGPEM KSTGEVMGVG DTFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPLVAGVA 960
  961 RDLINLGFEV VATAGTAKLI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVT LIINTTEGRQ1020
 1021 SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle