YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77380638, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSEWLDSL RNVDFNDLDT SNIGSWPPVV KGLAGGLLMV LVLALGYNFF ISDLESQLEL  60
   61 KREEEVTLKE QFASKAHMAA NLELYTQQMK EMENSFGVLL RQLPSDTEVP GLLEDITRTG 120
  121 LGSGLEFEEI KLLPEVTQQF YIELPIQITV TGAYHDLATF VSGVAGLPRI VTLHDFELAP 180
  181 ANPEGGPKLR MSILAKTYRY NDKGLQK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.57
Transmembrane Helix	29	51	0.86
Non-Cytoplasmic	52	207	0.62