YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56314388, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEKKLMEAA FDAEGLRRRF VDAPEMAPVR EEGAQRGEFR PAAVLVPVVL RPERLAVLLT  60
   61 RRTDHLHHHP GQISFPGGRV EKADVSAVMT ALRETEEETG LDPERIELLG ELPEYFTGTG 120
  121 FRITPVVGLV HPPFELKLDT FEVAEAFEVP LAHFLDPANH ERHTMEYQGR MRQYYAMPYE 180
  181 GYFIWGATAG ILVSLYRFLG GS

Type	Start	End	Confidence
Cytoplasmic	1	180	0.83
Transmembrane Helix	181	200	0.88
Non-Cytoplasmic	201	202	0.83