YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56478100, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTRNEMAR RAAQELRDGY YVNLGIGMPT LVANHIPPGM DVWLQSENGL LGIGPFPTDA  60
   61 EVDADLINAG KQTVTTLAGS SLFSSADSFA MIRGGHIDLA ILGAMQVSEH GDLANWMIPG 120
  121 KLVKGMGGAM DLVAGVRRVV VMMEHCSKGG EPKILRRCEL PLTGAGVVNR IITDLCVLDV 180
  181 TPRGLRLREV APGVGIENVL AQTGAPVDVD EMVIS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.67
Transmembrane Helix	20	37	0.67
Non-Cytoplasmic	38	215	0.78