YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56314062, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKSLTVIAL CLSAAGMVAP AHAQSSGTLQ KIKDTGTITV GHRESSVPFS YLDANQKPVG  60
   61 YAMDLCAKVV DAVKTELKMP NLQVKYQPVT SQNRIPLMQN GTIDLECGST TNSVARQQQV 120
  121 GFSVAYFITS VRMGVRKDSG IDDIGDLDGK PVVTTTGTTS DELIKQNEKG RTINVKNIYG 180
  181 KDHADSFLMV DSGRAAAFVM DDILLAGLIA NSKNPSAFEI VGPSLRDEPY GVMVRKDDAP 240
  241 FKAIVDKTLV GLMKSGEAEK LYDKWFMKPI PPRNVNLNFP MSPALKAAFE NPTDKGVE

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	298	0.99