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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56477351, gi|...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAIPDYLE KTLNARVYDV AEETPLDLAP NLSARIHNRI YLKREDMQPV FSFKLRGAYN  60
   61 KMAHLPPQAL KRGVICASAG NHAQGVALSA QKLGVRAVIV MPTSTPQIKV DAVRARGGEV 120
  121 VLAGDSYSDA YAHSLELEKV DKLTFVHPYD DPDVIAGQGT IGMEILRAHP DPIHAIFCAV 180
  181 GGGGLIAGVA AYVKRLRPEI RIVGVETVDA DAMTRSLAAG ERVVLDQVGL FADGTAVKQI 240
  241 GEETFRLCRE YVDEMVLVDN DAICAALKDV FEDTRSILEP SGALAIAGAK EYAKRHNLHG 300
  301 KCLVAVASGA NMNFDRLRFV AERAEVGEQR EAVFAVTIPE RPGSFRKFCS LVGDRHITEF 360
  361 NYRYADAEQA HIFVGVSVHN RAEASRLIEM LGRHELPAVD LTDDEMAKSH VRYMVGGHAP 420
  421 HIDNELVYRF EFPERPGALM NFLTNLHSDW NISLFHYRNH GSDSGRVLVG MQVPPGDKTA 480
  481 FSAFLDRLGY ESADESGNPA YRMFLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle