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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56476956, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANWPEYVRQ RRPLVVGIVV FLVAAMVSGV LVLGLGHPGD NLGLSLNAAV VLLFSLLLGG  60
   61 LANQMAQLRA HRADLQRLVA ARSAEVRARE AELDRAQSVA HVGEQQLRKL STAIECSPAS 120
  121 IVITDRSGTI EYVNPQFERS TGYTAQEVVG KNPRILKSGN RSADEYAAMW ATITHGHVWR 180
  181 GEFENVRKDG AHYWERASIA PIRADDGMIS GFVAVKEDIT LQKRAERELR DREMKLAALI 240
  241 ASLPDLMFVV DQNRCIAEFH APDPGLLLTP PECFLGRPYA RTLPPAVVVK LDEALEEISA 300
  301 TGGAKQVEYT LDLPRGRHHF SASVSRLAGS GLVPEGFIVL VRDLTERVRM EQALIESELR 360
  361 YRELFANSRV VMLVIDPVDG RIVEANAKAC EYYGYDPVSL TRMKIEDINV PGREPLRFEM 420
  421 VQARKPDTFR CCHRLAGGQL RDVEVASSPI EIAGRKLLYS IVRDVTERKR FEERMRQAMV 480
  481 VFKASSQGIM TTDAQGVITS VNPAFCTITG YLAAEVIGRK SSMFKPERHE ATFFDAMWTS 540
  541 IVESGSWAGE VWSRRSDGDR YPQWVTITAV RDTDGRIAEY VTLFSDITER KQQEVAMWRQ 600
  601 ANFDPLTGLA NRSLLQDRLD RALAHARRHG CKVGLLFLDL DGFKWINDSL GHDVGDELLV 660
  661 DVARRLNSCV RDEDTVARLG GDEFTVVVHD LADRADLGAI ADKLVAVLRE PFALRGARHH 720
  721 ISGSVGITVF PDDGDDVQTL LRNADIAMYK AKQAGKNRAQ PYAPHMQADA LARVHLEADL 780
  781 RMAVEQRAFE LHYQPIVDCA SGALVGAEAL IRWKHPERGM ISPLEFIPVA EECGLIVPIG 840
  841 EWVLREVVRQ RRDWLARGHP PLRLTLNVSG VQFREAGLPE LVRTLLAEFG TARSSLVFEI 900
  901 TESVLMGGSE NVEARMCDIK EQGICFALDD FGTGFSSLSY LKRFPVDIVK IDRSFVRDCP 960
  961 DDRNDATLVE AIINMAHSLG LRVTAEGVES AEQREFLRAL GCDYLQGYLI GKPLAADAFE1020
 1021 ALMAPLRSAA AAPHCTESC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle