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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56476341, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDAPPKLD SLADFLSSVE LLSPFTRDEL EQLAGQAQPR FLAFGETVCS AGEPADGVFV  60
   61 IRSGSVRIFA DEHGKEISLG VRKARETVAE MAMLREYRHE FSARASAKTE LLLIPRQAFE 120
  121 PVLAKNPAAQ AFVTSYVAIG SAGGVVARLF DLRGKVDRAE LEELVRSVGV KRVAAGREIL 180
  181 KQDARDDRRL YVVRQGEVRL VRTEQGSEYP LATLGHGEIF GEKACLMRQE QVASVVAVVD 240
  241 TTLLVVPEKS VHQILERNPK LREVLEERIR FVERELQRQK KLAERRNLRV MLDLQSKPEL 300
  301 GERLIRRFPL VEQAEEMDCG AACLAMICRH YDIPMTLGKL RELANVTTQG ATLDSLARAG 360
  361 ESLGFTTRGV QCTFDALLGF ELPFIVHWEG YHYVVVYGVS KRQVWVADPA VGFRKIAIEE 420
  421 FERGWSGTCL LFTPGQNLAQ LTVSRSPWLR FVSYLRPYKK ILAHLVMATF VIQVLGIVPP 480
  481 LIIQNILDGV IVHENVSLLH LLIAGLVITN LFTLLMSGIR AFLANFMVRN MDFAMMSQFF 540
  541 KHTLSLPFSF FAKRKTGDIF ARFQENQTIR AFLTESTVTT VLNLLMVFIY FTILFLYNVK 600
  601 MTLLLLAFVI PIMALTVLVT PKIKNYAREV FTTSTDAKAF LMEALGGVET VKGMGIERPV 660
  661 RLKWEKKYAK ALEVQYRAQR FNVLVGVASQ VLNAATTIAI LWVGASQVLA HQLTIGQLIA 720
  721 FNALMGSVLA PLMGLVALWS QVNDAGVAME RLGDVLDMEP EQRPEEVASR VVLPDLQGHI 780
  781 AFEGVYFRYG GDETPYVLEN ISFEIKPGEL VAIVGRSGSG KTTLAKLLVG FYPPTDGRIV 840
  841 VDGYDMATID KEYYRAQVGY VMQSNLLFSG TIAENIASGD EAPDRRRIEE VARMADAHAF 900
  901 IRKMPLGYEQ IVGERGVGLS GGQIQRLCIA RALYHDPRLL VFDEATSALD TQSESNIISN 960
  961 MHDILAGRTA VVIAHRLSTI MRADKILVLY EGAIVEQGRH DELVDRRGMY YQLVQKQLAA1020
 1021 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle