YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57642035, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLGGFSRG GEYEKKTWDV LIIGAGPAGF TAAIYAARYG LETLIISKDL GGNMALTDLI  60
   61 ENYPGFPEGI SGSELTNRMH EQVKKLGVDV IFDEVVRIDP AECAYYEGPC KFTVKTANGK 120
  121 EYKARTIIIA VGAAPRKLRV PGEEELTGKG VSYCATCDGP LFKGKKVIVV GGGNTALQEA 180
  181 LYLKSIGVDV TLVHRRQQFR ADKILQDRFK ESGIPAILDT VVTEIIGKDK VEAVRLKNVK 240
  241 TGEETVMEVD GVFIFIGYEP KTDFVKHLGI TDEYGYIPVD MYMRTKVPGI FAAGDITNVF 300
  301 KQIAVAVGQG AIAANSAKEF LEEWKNKNSE

Type	Start	End	Confidence
Cytoplasmic	1	16	0.75
Transmembrane Helix	17	37	0.75
Non-Cytoplasmic	38	330	0.94