YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310686, att...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISGAAAGAL AKTVIAPLDR TKINFQIRND VPFSFRASLR YLQNTYANEG VLALWRGNSA  60
   61 TMARIVPYAA IQFTAHEQWR RILHVDKDGT NTKGRRFLAG SLAGITSQSL TYPLDLARAR 120
  121 MAVTDRYTGY RTLRQVFTKI WVEEGPRTLF RGYWATVLGV IPYAGTSFFT YETLKREYYE 180
  181 VVGNNKPNTL VSLAFGAAAG AAGQTASYPL DIVRRRMQTM RVNTAGGDRY PTILETLVKI 240
  241 YREEGVKNGF YKGLSMNWIK GPIAVGISFS TYDLIKAWLT ELANLRRVEK

Type	Start	End	Confidence
Cytoplasmic	1	149	0.74
Transmembrane Helix	150	170	0.71
Non-Cytoplasmic	171	189	0.88
Transmembrane Helix	190	212	0.68
Cytoplasmic	213	290	0.69