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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ih-PC, FBpp03009...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHFDDVSLY GTPKEEPMPN IPIVSEKVSA NFLKSQLQSW FQPTDNRLAM KLFGSRKALV  60
   61 KERIRQKTSG HWVIHPCSSF RFYWDLCMLL LLVANLIILP VAISFFNDDL STRWIAFNCL 120
  121 SDTIFLIDIV VNFRTGIMQQ DNAEQVILDP KLIAKHYLRT WFFLDLISSI PLDYIFLIFN 180
  181 QDFSDSFQIL HAGRALRILR LAKLLSLVRL LRLSRLVRYV SQWEEVYFLN MASVFMRIFN 240
  241 LICMMLLIGH WSGCLQFLVP MLQGFPSNSW VSINELQESY WLEQYSWALF KAMSHMLCIG 300
  301 YGRFPPQSLT DMWLTMLSMI SGATCYALFL GHATNLIQSL DSSRRQYREK VKQVEEYMAY 360
  361 RKLPRDMRQR ITEYFEHRYQ GKFFDEELIL GELSEKLRED VINYNCRSLV ASVPFFANAD 420
  421 SNFVSDVVTK LKYEVFQPGD IIIKEGTIGT KMYFIQEGVV DIVMANGEVA TSLSDGSYFG 480
  481 EICLLTNARR VASVRAETYC NLFSLSVDHF NCVLDQYPLM RKTMETVAAE RLNKIGKNPN 540
  541 IMHQKDEQLS NPESNTITAV VNALAAEADD CKDDDMDLKE NLLHGSESSI AEPVQTIREG 600
  601 LPRPRSGEFR ALFEGNTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle