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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61403535, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSRLFRLH GLFVASHPWE VIVGTVAVTM CLMSMNAFAG NDQICGWNHQ CPKVQEKIIS  60
   61 GDMAILTITR CIAIIYIYIQ FKNLRQLGSK YILGIAGLFT IFSSFVFSTV VVHFLGKELT 120
  121 GLNEALPFFL LLIDLSKACT LAKFALSSNS QEEVRENIAQ GMAILGPTFT LDAVVECLVI 180
  181 GVGTMSGVRQ LEIMCCFGCM SVLANYFVFM TFFPACVSLV LELSRESREG RPIWQLSHFA 240
  241 RVLEEEEGNK PNPVTQRVKM IMSLVLALVH AHSRLKTESP AHNISSSDVV LPTSNMESDR 300
  301 SMSSVDLEQV ITLSLALLLA AKYVFFEQAE TESSLSIKTT VATPNCSLIN RRGGEERCQR 360
  361 DSAPPKAIKG VNENKSEREA PDRSFSIGNP EDEERDKIQC RPVQECLAIL KDPKRGAGFL 420
  421 SNAEVMALVE SRGILGYRLE AVMESPERGV AIRREMLSGK LPDSSALENL PYKHYDYSKV 480
  481 VGSNCENVIG YVPVPVGVAG PLLLDGKEFH VPMATTEGCL VASTNRGCRA VTLSGGVSSR 540
  541 VLADGMTRGP VVQMPSACRA AEVKGWLESS EGFTEIKQAF DHTSRFARLD RLQVSLAGRN 600
  601 LYIRFQSQTG DAMGMNMLSK GTEQALGRLQ ERYPDMRLLA VSGNYCTDKK PAAVNWIHGR 660
  661 GKSTVCEAVI PARVVKEVLK SSTAALVELN ISKNLVGSAM AGSIGGFNAH AANIVTAIYI 720
  721 ACGQDPAQTV GSSNCITLME CVGTSGEDLY VSCTMPSLEL GTIGGGTGLP AQHACLQMLG 780
  781 VGGASVQCPG ENSRTLARIV CASVLAGELS LMAALAAGHL VQSHMTHNRS KVNLREPEGQ 840
  841 PKEAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle