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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62078741, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALLFLGSL LMSLDLTLSA PPWKSKEFKD GAGDPSVVLT VDGKLCHFPF QYHRRLYHKC  60
   61 IHKGQPGSRP WCATTPNFDE DQQWGYCLEP KKVKDHCSKH SPCHKGGTCV NTPNGPHCLC 120
  121 PEHLTGKHCQ REKCFESQLL KFFHENEIWF RTGPGGVARC QCKGPQAVCK LLTSQVCRVN 180
  181 PCLNGGTCLL VEDHRLCHCP AGYAGPFCDL DLKATCYEDR GLSYRGQAKT TLSGAPCQRW 240
  241 ASEATYRNMT ETQALSWGLG HHAFCRNPDN DTRPWCYVWS GDRLSWDYCD LEQCQMPTLT 300
  301 SPVSPESHDM LKPRPPILQM PQFPSLSDAL DNSTRNQNVV SRTSTVVCGQ RFRKRLSSLR 360
  361 RVVGGLVALP GSHPYIAALY WGDSFCAGSL IDPCWVLTAA HCLQKRPAPE ELTVVLGQDR 420
  421 HNQSCERCQT LAVHSYRLHE GFSSKTYQHD LALLRLRGRK NSCAILSPHV QPVCLPSSAA 480
  481 PPSETVLCEV AGWGHQFEGA EEYATFLQEA QVPFISLDRC SSSNVHGDAI LPGMLCAGFL 540
  541 EGGADACQGD SGGPLVCDEG VTERQLTLRG VISWGSGCGD RNKPGVYTDV ANYLDWIQEH 600
  601 TAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle