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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61806572, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVASTLAK KRALAAGFGT NSNAVKYLNQ NFETLRSECL SRGELFCDPA FPAAPEALGF  60
   61 NELGPRSSKT RGVEWKRPGQ LNSSPEFIVG GATRTDICQG ALGDCWLLAA IASLTLNEDV 120
  121 LARVVPSDQG FGQDYAGIFH FQFWQFGEWV DVVVDDRLPT RDGELLFVHS VTGSEFWSAL 180
  181 LEKAYAKVNG CYEALSGGST TEGFEDFTGG IAEMYELKSA PTNLFQIIKK ALDSGALLGC 240
  241 SIDITSAADS EAVTYQKLVK GHAYSLTGAT EVNYRSRKEK LVRVRNPWGQ VEWTGAWSDN 300
  301 SSEWNAVDPS ERENVKSEDG EFWMSFSDFV RQYSRLEICT LTPDTLTSDS LKHWSVCKFD 360
  361 GTWRKGSTAG GCRNHPYTFW MNPQFKIKLE EEDDDPDDNE VGCSVVIGLI QKNRRKMRKA 420
  421 GEDMHTIGYA IYEVPSQFHG QKEVHLDKNY FLTHAQKARS ETFINLREVS TRFKLPPGEY 480
  481 LIVPSTFDPH KNGDFCVRVF SEKQSEMQQC DDPIEANVDD EMVSEEEVDS GFRGLFTKLA 540
  541 GDDMEISASE LRTIFNKIVA KRTDIKTDGF SLDTCRVMVN LMDESGNGKL GLTEFATLWK 600
  601 KIQKYLGIYK KNDMDGSGCM STPEMRMALK EAGFSLNDCI HQSLAARYGD ADMTIDFDNF 660
  661 VSCVMRLEMM FKVFKRMDID HSGFIELDFF QWLSFAMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle