YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60649516, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESYRTLTVP LLSLLGLTLI SAFNLDTVNV IRKTGDANSL FGFSMAMHRQ LRPADKRMLL  60
   61 VGSPKAKALP NQRSKITGGL YNCDINIPGQ SCQRVMFDNE ENLQTENKEN QWMGVTVQSQ 120
  121 GPGGKILVCA HRYQRRLFVG SVQELRDLTG RCYVLSEDVT INEISDEDGG DWMFCNGRNR 180
  181 GHERFGSCQQ GMSATFTKDY HYLVFGAPGA YNWKGIVRLE QKNTSLFDKD IFDDGPYEVG 240
  241 DENRLDAELV PVPANSYLGF SLDSGKMLTK RGQLTIVAGA PRANHSGAVV LLKKDEAKSS 300
  301 LLTAEYTLEG SGLASSFGYD LAVLDINGDG WQDIVVGAPQ YFIKDGDIGG AIYVYLNEEG 360
  361 AWDKITPKRI DGPAYSMFGL AVENMGDVNL DGYQDVAVSA PYDSNGAGNV IIFHGSPQGL 420
  421 KKSQVLGGKD HNVKLFGYSL AGNMDLDRNN YPDLAIGSLS DSVFVYRSRS VINIEKTVTT 480
  481 TPKELDLTKK NCNNGNNICL DVKACFKFSV KPKTYNPTLK VAYTIRVESE RKKLNLPSRV 540
  541 IFNPRSNNDY ESTGIVELKG QGTESCIYRN LMLQETLKDK LRGIPIEVSV EILNQNKRRR 600
  601 RQAALPNLLP ILDSNQEATT VAMVQFIKEG CGADHLCQSD LQLQYKFHTR EPNKDNFFPF 660
  661 DEEKGVPILS LSDQKEIALE IKAVNLGEDA YETQLTASFP KSLSYSAVRT QSGDKQISCL 720
  721 VNQNGSQADC DLGNPFKKDA QTTFYIILST GGISLDTTEI EIDLKLKTTS EQKQLQAVKA 780
  781 KAIVKIQLLL SLSGVAKPSQ VFFTGEVKGE SAMKVAGDVG SPIDYEFRVT NLDKPLKSFG 840
  841 RASMIIQWPK HNSQGKWLLY LMKMTSTGLD SLSCTNSDEV NKLGLKELSV SRTKREVGET 900
  901 SAAEGKTAFF TDKRKYTLLS CDDGAECITF ICPLTGMDSN AVISLRAYLW NATFLEDYAK 960
  961 LNYVDIIAKA SLDFKTTATN IQLKNEPSQV RVTVFPERKV AQYGGMPWWV ILVAILLGLL1020
 1021 LLGLLVFLLW KCGFFKRSKY DDSVPSYNAV RIKREERDNL SGKDEMDSSE KKQWMTSWNE1080
 1081 NESYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle