YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61806618, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFVKGVRTT QATQQRVIYK RLWGHELKDK KRTETALKAG EDRAILLGLS MVFSSVMMYF  60
   61 VICITMVRAY PDSLLIDETT CTVLNSSLTK EINCSYNCGS DCWRSSKYPC LQVYVSLNAT 120
  121 GRIGLLSHNE EMLDVSSECF YVPKCQKDHT AMRVLIQNIS DHLKMQQQVR CFHDPSEHQA 180
  181 SILLKRIYGS ASLLHSLFWP SCMLSGGTLI ILMVKLTQYL SILCEQIDKA PK

Type	Start	End	Confidence
Cytoplasmic	1	44	0.70
Transmembrane Helix	45	67	0.84
Non-Cytoplasmic	68	192	0.67
Transmembrane Helix	193	216	0.74
Cytoplasmic	217	232	0.54