YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lectin-21Ca-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQHANFFLH VFMACGLYGI RAKDVCPRMS TDKEVCLVEL APVLKYISNN HKSHWNSANE  60
   61 VQVNETRKQL AKIEGQEKET NDKIKVIHDN VDNEFNALSA KIKNVKNIQR HLASLELQLQ 120
  121 ETKKALNLSV EAKKVMPKTE IPSQFQKIGW RHFFIEKKHK VDWFKATSMC HKMGAHLLTI 180
  181 QSEDELDAIR TELKDINDGS HDFWLDINDI AKWGEFISLA TGMNPPFLKW HKHRPQVQIH 240
  241 QRCVHLRGGE MMDGKCSEQF LFICQLAVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.64
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	269	0.97