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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62471413, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAAIVIVKQ HKEQQHQQHQ QQHRQDQQDQ KDPRAAKQIC NINLCGFLRR SGADDVDVIE  60
   61 PRSPGHAADV DVAAAAAGAT TSVAATAAAA AAATTRAAAT TRAVIIIMAL VVSIMQQQQQ 120
  121 SLLWPFCNGL AAAAASTGQP DDSGDGPTLS TFLSSSQSQS PSPPAASASA SSPSSFSSFA 180
  181 VAHGPQTEAT NHTFKSLAFL DASFGSDLFA QTDAKRERSG AADEESQDAD TSQSLPIFDF 240
  241 GMPRNITGRT GHTEAIIKCR VDSLHDKSVS WIRKRDLHIL TVGTATYTSD KRFQVTESKD 300
  301 SREWTLHVKA PLAKDSGIYE CQVNTEPKMS MAFQLNIIEI SPDAKAVISG PPDLHFKAGS 360
  361 AIILNCLVQQ PSVKDIGPIY WYRGEHMITP FDADDGQPEI PAGRGEHPQG IPEDTSPNDI 420
  421 MSEVDLQMEF ATRIAMESQL GDTLKSRLRI SNAQTTDTGN YTCQPTTASS ASVLVHVING 480
  481 ESWE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle