YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62001779
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTELFLASV LLVGVNSRYL LVEEPGYYIE QYEDQPERWG SSRVRRQAGA LTVNSDGTSG  60
   61 AAVKIPITGN ENHKLSAIGS VDLIDRMKLG AATAGLAYDN VNGHGATLTK THIPGFGDKM 120
  121 TAAGKVNLFH NDNHDLNANA FASKNMPNIP QVPNFNTVGA GVDYMFKDKI GASASAAHTD 180
  181 FINRNDYSLG GKLNIFKTPT TSLDFNAGWK KFDTPFTKSS WEPSTSFSFS KYF

Type	Start	End	Confidence
Signal Peptide	1	17	0.97
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	233	0.99