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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9220-PC, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQHTMTKRK TLIIGFFGIA LGLCIGTMLK NYLALEIVKR CSLRPTNLKT PADIIGLRDE  60
   61 DTIQNSQRNL VFVGVMTAKS FLEGRARAVY DTWGKEVPGR MAFFSSEGSY SDDLPVVGLK 120
  121 NVDDRYPPQK KSFMMLYYMY EHYIDRFEWF IRADDDVYME PDKLERFLRS IDSSKPQFIG 180
  181 QAGKGNSEEF GLLSLEFDEN FCMGGPGVIL SSETLRRVAP HIPSCLKNLY STHEDVEVGR 240
  241 CVQKFAGIPC TWNYEMQYIL RHNSSGRNAY TGKLKRKEIH NAITLHPIKQ APLMYRLHSY 300
  301 VQGLKAEEMR QESLLLHRDI KRMAKYLEVP DESTYMLPSV SPESDSTKRH FQDHNILGIS 360
  361 PELNKFVPAS TDDLLDWSFI ARSLYSASSA NPKQKIDSAM REGLEDAITE VMENINNYSR 420
  421 QRGRVIEFRE LLYGYHRLDA LHGQDMILDL LLIYKKYRGK KMTVPVRRHL YVQRAFTGIF 480
  481 VKEVDEDFYN VTLQQSLLGS LFQNGMARLS SHFTMPSGLL SPTQDKIVFV LPIAGRLGTF 540
  541 ERFLRTYERV CVRGEQHCDL LVVIFGSPDE LGDHLQLLHD LHARHVYQQV NWIQRSSAFS 600
  601 RGVALDVAAR SSYIRQEDII LFIDVDMVFE VETLQRVRMH TQRGKQVYLP IVFSQYDPQR 660
  661 RSGDAGGSED EGETPRIDDE RGYFRQFGFG ICAIYKSDIL DEDINGFDKD ITGWGLEDVK 720
  721 FLEKIVRVGT RQRGFLANTA ELAMDYNEAA EQWRRLSVFR APDPTLVHIY HDISCDVQLD 780
  781 APQYNMCLGT KANSLGSTRL MEQLFHSSPE NVQFAADFNR QKQQQQQQQQ AR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle